Contents Menu Expand Light mode Dark mode Auto light/dark mode
OpenMS 2.7.0 documentation
Logo
OpenMS 2.7.0 documentation

Introduction

  • What is OpenMS?
  • Background
  • Entry Points to OpenMS

Installation Guides

  • GNU/Linux
  • macOS
  • Windows

OpenMS Applications and Tools

  • OpenMS Graphical User Interfaces
  • TOPP Tools
    • Introduction to TOPP
    • Types of TOPP Tools
  • UTILS Tools
  • Command Line Interface
  • TOPPView: Visualize with OpenMS
    • Views in TOPPView
    • Display Modes and View Options in TOPPView
    • Data Analysis in TOPPView
    • Data Editing in TOPPView
    • TOPPView Hotkeys

Run Workflows with OpenMS Tools

  • Overview
    • OpenMS in KNIME
    • OpenMS in Nextflow
    • OpenMS on Galaxy

Tutorials and Quick Start Guides

  • OpenMS User Tutorial
  • Worked Examples: Different OpenMS Methods to Achieve the Same Outcome
  • Quick Start Guides
    • Contributor’s Quick Start Guide
    • User Quickstart Guide

Develop with OpenMS

  • OpenMS C++ Core Library
  • OpenMS API Reference
  • pyOpenMS
  • Build From Source
  • External Code using OpenMS
  • Developer Tutorial

Contribute to OpenMS

  • OpenMS Git Workflow
  • Write and Label GitHub Issues
  • Adding New Tool to The TOPP suite
  • Pull Request Checklist
  • Reporting Bugs and Issues
  • Advanced
    • Developer Guidelines For Adding New Dependent Libraries
    • Custom Compilation of OpenMS
    • Build Custom KNIME Plugin

Downloads

  • OpenMS Installers
  • Workflows
  • OpenMS Releases
  • Other Resources

Quick Reference

  • Contributor FAQ
  • Developer FAQ
  • Contact Us
  • OpenMS Glossary
  v: latest
Versions
latest
staging
develop
Downloads
pdf
html
On Read the Docs
Project Home
Builds
Back to top
Edit this page

TOPP Tools#

The following sections introduce TOPP, some general concepts and more specific information regarding each tool.

  • Introduction to TOPP
  • Types of TOPP Tools
Next
Introduction to TOPP
Previous
OpenMS Graphical User Interfaces
Copyright © 2022, OpenMS Team
Made with Sphinx and @pradyunsg's Furo